The ipyrad ethos

Welcome to ipyrad, an interactive assembly and analysis toolkit for restriction-site associated DNA (RAD-seq) and related data types. Please explore the documentation to find out more about the features of ipyrad.

Our goals:

  • Simple: Easy to install, easy to use.
  • Resourceful: Documentation, tutorials, cookbooks, and help forums available.
  • Reproducible: Promoting the use of Jupyter Notebooks to organize workflows.
  • Flexible: API access to functions and data to build custom assemblies.
  • Transparent: Providing human readable code and data files.

Contact us:

  • Questions? Join the conversation on gitter.
  • Have a feature request? Raise a ticket on github.