The ipyrad ethos
Welcome to ipyrad, an interactive assembly and analysis toolkit for restriction-site associated DNA (RAD-seq) and related data types. Please explore the documentation to find out more about the features of ipyrad.
Our goals:
Simple: Easy to install, easy to use.
Resourceful: Documentation, tutorials, cookbooks, and help forums available.
Reproducible: Promoting the use of Jupyter Notebooks to organize workflows.
Flexible: API access to functions and data to build custom assemblies.
Transparent: Providing human readable code and data files.